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Beebee & Rowe: An Introduction to Molecular Ecology: 2e

Chapter 03

Useful Software

T-COFFEE
A program that will align multiple protein or DNA sequences, and thus permit investigation of haplotype differences among individuals.
Available at http://www.ebi.ac.uk/t-coffee/ as freeware.

GIMLET v.1.3.2. (Valière 2002)
Used to estimate genotyping errors, kinship between individuals, probability of identity (PID), and population size from enotyped samples.
Available at http://pbil.univ-lyon1.fr/software/Gimlet/gimlet%20frame1.html as freeware.