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Companion Website
Sansom & Horton: Internet for Molecular Biologists
Useful Web Links
Useful Web Links* Protein explorer :http://www.proteinexplorer.org
* Netscape: www.netscape.com
* Chime from MDL Information Systems: www.mdlchime.com
* World Index of Molecular Visualization Resources (includes information on other viewers: Cn3D, DINO, MAGE, PyMOL, VMD: http://www.molvisindex.org
*review fo the VMD molecular viewer: http://news.bmn/com/hmsbeagle/110/review s/sreview
* PDB Lite search interface: http://www.pdblite.org
* Protein Data Bank www.pdb.org
* UMass Chime Resources: www.umass.edu/microbio/chime
* DRuMS standard color schemes: www.umass.edu/molvis/drums
* Molecular Visualization Freeware Email List: www.umass.edu/microbio/rasmol/raslist.htm
* Biochemistry in 3D: www.worthpublishers.com/lehninger3d/
* Alignments by Combinatorial Extension c1.sdsc.edu/ce.html
* Win4Lin (commercial, Windows support for Linux): www.trelos.com
* VMWare (commercial, Windows support for Linux) www.vmware.com
* Citrix Metaframe (commercial, remote Windows from unix): www.citrix.com
* DeepView/Swiss-PDBViewer (also see DeepView section of World Index): www.expasy.ch/spdbv/mainpage.html
* Accelrys/WebLab Fiewer Pro (also see World Index): www.accelrys.com
* RasMol 2.6 with help for beginners www.umass.edu/microbio/rasmol
* RasMol 2.7: www.openrasmol.org
* History of molecular visualization: www.umass.edu/microbio/rasmol/history.htm
* Making Chime Tutorials: www.umass.edu/microbio/chime/prssw c/presreqt.htm
* Morphing Methods (includes detailed instructions on aligning molecules to compare their structures www.umass.edu/microbio/chime/m orpher/morphmtd.htm
* XYZ animations of infrared spectra (by Motyka, Lahti and Lancashire): www.umass.edu/microbio/chime/ir-spect
* DeepView Swiss-Pdb Viewer: www.expasy.cbr.nrc.ca/spdbv
* Tutorial For Deep View/Swiss-PdbViewer (by Gail Rhodes): www.usm.maine.edu/rhodes/SPVTut/index. html
*WebLab Viewer www.accelrys.coim/viewer/index.html